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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
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- Orthologues
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Gene: SMARCB1 OTTHUMG00000150737

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

Synonyms

Sfh1p, Snr1, hSNFS, PPP1R144, Ini1, RDT, BAF47

Location

Chromosome 22: 23,786,963-23,834,516 forward strand.

VEGA68:CM000684.2

About this gene

This gene has 9 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMARCB1-005	OTTHUMT00000319876.1	1728	394aa	OTTHUMP00000198413	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS82699	G5E975
SMARCB1-001	OTTHUMT00000319872.1	1690	385aa	OTTHUMP00000198410	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13817	Q12824
SMARCB1-002	OTTHUMT00000319873.1	1643	376aa	OTTHUMP00000198411	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46671	-
SMARCB1-003	OTTHUMT00000319874.1	1182	339aa	OTTHUMP00000198412	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B5MCL5
SMARCB1-006	OTTHUMT00000319877.8	889	227aa	OTTHUMP00000198414	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JTA6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SMARCB1-009	OTTHUMT00000488142.2	269	90aa	OTTHUMP00000281270	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RRB8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SMARCB1-008	OTTHUMT00000488143.1	242	81aa	OTTHUMP00000281271	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RQQ2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SMARCB1-007	OTTHUMT00000319878.1	660	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SMARCB1-004	OTTHUMT00000319875.1	605	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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Gene-based displays