This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: CLCN1 OTTHUMG00000152695

.

Description

chloride channel 1, skeletal muscle

Synonyms

CLC1, ClC-1

Location

Chromosome 7: 143,316,126-143,352,083 forward strand.

VEGA68:CM000669.2

About this gene

This gene has 4 transcripts (splice variants), 8 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CLCN1-001	OTTHUMT00000327420.1	3172	988aa	OTTHUMP00000202223	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5881	P35523
CLCN1-003	OTTHUMT00000327422.1	569	102aa	OTTHUMP00000202225	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C1F4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CLCN1-002	OTTHUMT00000327421.1	491	76aa	OTTHUMP00000202224	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C0N6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CLCN1-004	OTTHUMT00000327423.1	278	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

.

Summary

.

.

Gene-based displays