Description
nibrin
Synonyms
AT-V1, ATV, AT-V2
Location
Chromosome 8: 89,933,336-90,003,228 reverse strand.
VEGA68:CM000670.2
About this gene
This gene has 13 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NBN-001 | OTTHUMT00000331583.3 | 4666 | 754aa | OTTHUMP00000204086 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6249 | O60934 | |
| NBN-003 | OTTHUMT00000331585.2 | 4523 | 672aa | OTTHUMP00000204088 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43753 | A0A0C4DG07 | |
| NBN-014 | OTTHUMT00000476313.1 | 786 | 124aa | OTTHUMP00000275539 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NBN-011 | OTTHUMT00000375818.3 | 701 | 164aa | OTTHUMP00000226827 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NBN-013 | OTTHUMT00000375820.2 | 565 | 92aa | OTTHUMP00000225074 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NBN-010 | OTTHUMT00000375817.2 | 535 | 159aa | OTTHUMP00000225072 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NBN-005 | OTTHUMT00000331587.1 | 2233 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| NBN-004 | OTTHUMT00000331586.1 | 2043 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| NBN-002 | OTTHUMT00000331584.2 | 4907 | 58aa | OTTHUMP00000204087 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NBN-009 | OTTHUMT00000375819.1 | 593 | 58aa | OTTHUMP00000225073 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NBN-006 | OTTHUMT00000331588.1 | 593 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NBN-008 | OTTHUMT00000331590.1 | 503 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NBN-012 | OTTHUMT00000375816.1 | 494 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
