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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: ABCB11 OTTHUMG00000154039

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Description

ATP-binding cassette, sub-family B (MDR/TAP), member 11

Synonyms

PFIC-2, SPGP, PGY4, ABC16

Location

Chromosome 2: 168,922,938-169,031,322 reverse strand.

VEGA68:CM000664.2

About this gene

This gene has 3 transcripts (splice variants), 24 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ABCB11-001	OTTHUMT00000333616.2	4775	1321aa	OTTHUMP00000204927	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46444	O95342
ABCB11-003	OTTHUMT00000333618.2	2822	72aa	OTTHUMP00000207338	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ABCB11-004	OTTHUMT00000333619.1	576	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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