Description
cleavage and polyadenylation specific factor 4, 30kDa
Synonyms
CPSF30, NAR
Location
Chromosome 7: 99,438,922-99,457,371 forward strand.
VEGA68:CM000669.2
About this gene
This gene has 13 transcripts (splice variants), 3 orthologues and 1 paralogue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
CPSF4-001 | OTTHUMT00000336252.1 | 1738 | 244aa | OTTHUMP00000206234 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47652 | - | |
CPSF4-003 | OTTHUMT00000336254.1 | 1691 | 269aa | OTTHUMP00000206236 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5664 | O95639 | |
CPSF4-004 | OTTHUMT00000336255.1 | 942 | 191aa | OTTHUMP00000206237 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83205 | B7Z7B0 | |
CPSF4-002 | OTTHUMT00000336253.1 | 1644 | 211aa | OTTHUMP00000206235 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JEV9 | |
CPSF4-010 | OTTHUMT00000336261.21 | 745 | 112aa | OTTHUMP00000206240 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9K0K2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CPSF4-007 | OTTHUMT00000336258.2 | 687 | 229aa | OTTHUMP00000206239 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C016 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
CPSF4-011 | OTTHUMT00000336262.2 | 578 | 193aa | OTTHUMP00000206241 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C419 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
CPSF4-005 | OTTHUMT00000336256.1 | 735 | 44aa | OTTHUMP00000206238 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF4-008 | OTTHUMT00000336259.1 | 569 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CPSF4-009 | OTTHUMT00000336260.1 | 927 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF4-006 | OTTHUMT00000336257.1 | 825 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF4-012 | OTTHUMT00000336389.1 | 689 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF4-013 | OTTHUMT00000336399.2 | 574 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |