Description
nuclear cap binding protein subunit 2, 20kDa
Synonyms
NIP1, Cbc2, CBP20
Location
Chromosome 3: 196,935,402-196,942,597 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 14 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
NCBP2-001 | OTTHUMT00000340470.2 | 2169 | 156aa | OTTHUMP00000208152 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3323 | P52298 | |
NCBP2-004 | OTTHUMT00000340473.1 | 1946 | 103aa | OTTHUMP00000208153 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46986 | - | |
NCBP2-006 | OTTHUMT00000340475.1 | 1133 | 138aa | OTTHUMP00000208155 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77878 | - | |
NCBP2-007 | OTTHUMT00000340476.1 | 2216 | 86aa | OTTHUMP00000208156 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B3KSB0 | |
NCBP2-011 | OTTHUMT00000340480.1 | 676 | 86aa | OTTHUMP00000208158 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B3KSB0 | |
NCBP2-010 | OTTHUMT00000340479.2 | 564 | 83aa | OTTHUMP00000208157 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JQX9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
NCBP2-012 | OTTHUMT00000340481.3 | 548 | 15aa | OTTHUMP00000208159 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
NCBP2-003 | OTTHUMT00000340472.1 | 1167 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
NCBP2-005 | OTTHUMT00000340474.1 | 2220 | 54aa | OTTHUMP00000208154 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WE41 | |
NCBP2-014 | OTTHUMT00000340483.1 | 771 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NCBP2-002 | OTTHUMT00000340471.1 | 4161 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
NCBP2-008 | OTTHUMT00000340477.1 | 1096 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
NCBP2-009 | OTTHUMT00000340478.1 | 669 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
NCBP2-013 | OTTHUMT00000340482.1 | 552 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |