Description
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
Synonyms
sema5, semaV, SemA, LUCA-1
Location
Chromosome 3: 50,267,558-50,277,546 forward strand.
VEGA68:CM000665.2
About this gene
This gene has 15 transcripts (splice variants), 13 orthologues and 10 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SEMA3B-001 | OTTHUMT00000346890.4 | 2958 | 749aa | OTTHUMP00000275951 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74941 | Q13214 | |
| SEMA3B-016 | OTTHUMT00000479024.1 | 2755 | 748aa | OTTHUMP00000277825 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77744 | - | |
| SEMA3B-009 | OTTHUMT00000346898.4 | 2292 | 754aa | OTTHUMP00000275952 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77743 | - | |
| SEMA3B-005 | OTTHUMT00000346894.2 | 2221 | 406aa | OTTHUMP00000277826 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77745 | - | |
| SEMA3B-007 | OTTHUMT00000346896.2 | 1765 | 406aa | OTTHUMP00000277827 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77745 | - | |
| SEMA3B-010 | OTTHUMT00000346899.3 | 934 | 214aa | OTTHUMP00000275950 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEMA3B-003 | OTTHUMT00000346892.2 | 1591 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SEMA3B-006 | OTTHUMT00000346895.1 | 2065 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SEMA3B-008 | OTTHUMT00000346897.1 | 3283 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA3B-002 | OTTHUMT00000346891.3 | 3158 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA3B-004 | OTTHUMT00000346893.3 | 2710 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA3B-015 | OTTHUMT00000346904.1 | 1088 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA3B-011 | OTTHUMT00000346900.2 | 1061 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA3B-013 | OTTHUMT00000346902.1 | 1011 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA3B-012 | OTTHUMT00000346901.1 | 594 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
