Description
MDS1 and EVI1 complex locus
Synonyms
MDS1-EVI1, PRDM3
Location
Chromosome 3: 169,083,507-169,663,775 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 19 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| MECOM-020 | OTTHUMT00000351519.1 | 5732 | 1042aa | OTTHUMP00000213164 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54669 | - | |
| MECOM-018 | OTTHUMT00000351520.1 | 3691 | 1051aa | OTTHUMP00000213165 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3205 | Q03112 | |
| MECOM-004 | OTTHUMT00000351517.3 | 3939 | 1230aa | OTTHUMP00000213163 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EQ57 | |
| MECOM-019 | OTTHUMT00000351553.1 | 3593 | 1052aa | OTTHUMP00000213187 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0C3SFZ7 | |
| MECOM-016 | OTTHUMT00000351557.1 | 3508 | 1052aa | OTTHUMP00000213191 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0C3SFZ7 | |
| MECOM-017 | OTTHUMT00000351558.1 | 3374 | 1003aa | OTTHUMP00000213192 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EUL6 | |
| MECOM-011 | OTTHUMT00000351554.2 | 1792 | 103aa | OTTHUMP00000213188 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EPY2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-010 | OTTHUMT00000351555.1 | 1533 | 103aa | OTTHUMP00000213189 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EPY2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-009 | OTTHUMT00000351556.1 | 1097 | 103aa | OTTHUMP00000213190 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EPY2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-015 | OTTHUMT00000351825.2 | 965 | 321aa | OTTHUMP00000213304 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H9KVD4 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| MECOM-012 | OTTHUMT00000351759.2 | 638 | 125aa | OTTHUMP00000213275 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ERX0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-008 | OTTHUMT00000351760.2 | 580 | 67aa | OTTHUMP00000213276 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EU48 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-006 | OTTHUMT00000351559.2 | 468 | 21aa | OTTHUMP00000213193 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-005 | OTTHUMT00000351754.2 | 393 | 125aa | OTTHUMP00000213273 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-007 | OTTHUMT00000351758.2 | 379 | 28aa | OTTHUMP00000213274 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECOM-003 | OTTHUMT00000351516.4 | 3270 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MECOM-002 | OTTHUMT00000351515.1 | 1286 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MECOM-001 | OTTHUMT00000351514.2 | 895 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECOM-014 | OTTHUMT00000351827.1 | 418 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
