Description
plasminogen activator, tissue
Location
Chromosome 8: 42,175,233-42,207,724 reverse strand.
VEGA68:CM000670.2
About this gene
This gene has 13 transcripts (splice variants), 9 orthologues and 7 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PLAT-001 | OTTHUMT00000377100.1 | 2706 | 562aa | OTTHUMP00000225784 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6126 | P00750 | |
| PLAT-003 | OTTHUMT00000377098.1 | 2599 | 562aa | OTTHUMP00000225783 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6126 | P00750 | |
| PLAT-002 | OTTHUMT00000377101.1 | 2516 | 516aa | OTTHUMP00000225785 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6127 | - | |
| PLAT-004 | OTTHUMT00000377104.1 | 1613 | 473aa | OTTHUMP00000225788 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83291 | B4DN26 | |
| PLAT-005 | OTTHUMT00000377102.1 | 2030 | 499aa | OTTHUMP00000225786 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ESF4 | |
| PLAT-006 | OTTHUMT00000377103.1 | 1655 | 436aa | OTTHUMP00000225787 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4DNJ1 | |
| PLAT-012 | OTTHUMT00000377109.2 | 670 | 178aa | OTTHUMP00000225790 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RGA1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PLAT-011 | OTTHUMT00000377110.2 | 549 | 157aa | OTTHUMP00000225791 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RHG4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PLAT-007 | OTTHUMT00000377099.1 | 2042 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PLAT-008 | OTTHUMT00000377106.1 | 604 | 96aa | OTTHUMP00000225789 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PLAT-013 | OTTHUMT00000377108.1 | 3462 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLAT-009 | OTTHUMT00000377107.1 | 584 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLAT-010 | OTTHUMT00000377105.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
