Description
two pore segment channel 2
Synonyms
TPC2
Location
Chromosome 11: 69,048,897-69,162,440 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 10 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TPCN2-001 | OTTHUMT00000396878.2 | 2931 | 752aa | OTTHUMP00000237209 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8189 | Q8NHX9 | |
| TPCN2-010 | OTTHUMT00000488993.1 | 2856 | 698aa | OTTHUMP00000281678 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GUM5 | |
| TPCN2-008 | OTTHUMT00000488991.1 | 2736 | 584aa | OTTHUMP00000281676 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GTM1 | |
| TPCN2-003 | OTTHUMT00000396881.1 | 2000 | 570aa | OTTHUMP00000237212 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ETX0 | |
| TPCN2-002 | OTTHUMT00000396877.2 | 2203 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TPCN2-007 | OTTHUMT00000488994.1 | 4622 | 371aa | OTTHUMP00000281679 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A1B0GVQ7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TPCN2-009 | OTTHUMT00000488992.1 | 3824 | 584aa | OTTHUMP00000281677 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A1B0GTM1 | |
| TPCN2-005 | OTTHUMT00000396883.2 | 4376 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TPCN2-006 | OTTHUMT00000396882.1 | 435 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TPCN2-004 | OTTHUMT00000396880.2 | 2175 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
