Description
scavenger receptor class B, member 1
Synonyms
SRB1, SR-BI, CLA1, CLA-1
Location
Chromosome 12: 124,776,856-124,882,668 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 12 transcripts (splice variants), 4 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SCARB1-001 | OTTHUMT00000400164.2 | 3329 | 506aa | OTTHUMP00000239001 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45008 | - | |
| SCARB1-004 | OTTHUMT00000400166.2 | 2611 | 509aa | OTTHUMP00000239003 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9259 | A0A024RBS4 | |
| SCARB1-006 | OTTHUMT00000400165.1 | 2731 | 552aa | OTTHUMP00000239002 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q8WTV0 | |
| SCARB1-009 | OTTHUMT00000400172.1 | 1812 | 499aa | OTTHUMP00000239005 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H4X0 | |
| SCARB1-007 | OTTHUMT00000400170.1 | 1597 | 481aa | OTTHUMP00000239004 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B7ZKQ9 | |
| SCARB1-012 | OTTHUMT00000400173.2 | 581 | 146aa | OTTHUMP00000239006 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H5E8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCARB1-002 | OTTHUMT00000400167.1 | 2522 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SCARB1-003 | OTTHUMT00000400171.1 | 1845 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCARB1-010 | OTTHUMT00000400168.1 | 851 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCARB1-011 | OTTHUMT00000400175.1 | 720 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCARB1-013 | OTTHUMT00000400174.1 | 476 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCARB1-005 | OTTHUMT00000400169.1 | 5527 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
