Description
NOP2 nucleolar protein homolog (yeast)
Synonyms
NOP120, NSUN1, p120
Location
Chromosome 12: 6,556,863-6,568,691 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 22 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NOP2-005 | OTTHUMT00000402615.1 | 3038 | 808aa | OTTHUMP00000240265 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44811 | - | |
| NOP2-004 | OTTHUMT00000402611.1 | 2751 | 628aa | OTTHUMP00000240262 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58202 | - | |
| NOP2-001 | OTTHUMT00000402610.1 | 2736 | 845aa | OTTHUMP00000240261 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58204 | - | |
| NOP2-002 | OTTHUMT00000402612.1 | 2701 | 808aa | OTTHUMP00000240263 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44811 | - | |
| NOP2-007 | OTTHUMT00000402614.1 | 2683 | 812aa | OTTHUMP00000240264 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58203 | P46087 | |
| NOP2-003 | OTTHUMT00000402609.1 | 2613 | 812aa | OTTHUMP00000240260 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58203 | P46087 | |
| NOP2-021 | OTTHUMT00000402621.2 | 1080 | 275aa | OTTHUMP00000240266 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GYR3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NOP2-019 | OTTHUMT00000402622.2 | 848 | 250aa | OTTHUMP00000240267 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NOP2-018 | OTTHUMT00000402624.1 | 689 | 176aa | OTTHUMP00000240268 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NOP2-016 | OTTHUMT00000402628.1 | 668 | 81aa | OTTHUMP00000240272 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| NOP2-022 | OTTHUMT00000402626.2 | 657 | 159aa | OTTHUMP00000240270 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NOP2-015 | OTTHUMT00000402627.1 | 630 | 81aa | OTTHUMP00000240271 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| NOP2-006 | OTTHUMT00000402613.1 | 2510 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| NOP2-020 | OTTHUMT00000402625.1 | 572 | 98aa | OTTHUMP00000240269 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NOP2-010 | OTTHUMT00000402616.1 | 1002 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NOP2-013 | OTTHUMT00000402620.1 | 894 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NOP2-017 | OTTHUMT00000402618.1 | 889 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NOP2-012 | OTTHUMT00000402617.1 | 657 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NOP2-011 | OTTHUMT00000402619.1 | 598 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NOP2-009 | OTTHUMT00000402629.1 | 569 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NOP2-014 | OTTHUMT00000402623.1 | 561 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NOP2-008 | OTTHUMT00000402630.1 | 508 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
