Description
heterogeneous nuclear ribonucleoprotein A1
Synonyms
hnRNPA1, ALS20, hnRNP-A1
Location
Chromosome 12: 54,280,193-54,287,088 forward strand.
VEGA68:CM000674.2
About this gene
This gene has 17 transcripts (splice variants), 9 orthologues and 8 paralogues.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
HNRNPA1-001 | OTTHUMT00000405474.2 | 4121 | 320aa | OTTHUMP00000241883 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41793 | A0A024RB53 | |
HNRNPA1-002 | OTTHUMT00000405480.1 | 1842 | 372aa | OTTHUMP00000241887 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44909 | P09651 | |
HNRNPA1-012 | OTTHUMT00000405485.3 | 1539 | 267aa | OTTHUMP00000241891 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
HNRNPA1-023 | OTTHUMT00000468217.1 | 1294 | 307aa | OTTHUMP00000272521 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8W6I7 | |
HNRNPA1-018 | OTTHUMT00000405741.1 | 832 | 191aa | OTTHUMP00000242011 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YH80 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HNRNPA1-013 | OTTHUMT00000405739.1 | 711 | 231aa | OTTHUMP00000242009 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VZ49 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HNRNPA1-014 | OTTHUMT00000405740.1 | 569 | 113aa | OTTHUMP00000242010 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VYN5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HNRNPA1-015 | OTTHUMT00000405735.1 | 530 | 156aa | OTTHUMP00000242006 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8W646 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HNRNPA1-019 | OTTHUMT00000405737.1 | 481 | 145aa | OTTHUMP00000242007 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VTQ5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HNRNPA1-004 | OTTHUMT00000405478.1 | 1627 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HNRNPA1-003 | OTTHUMT00000405476.1 | 1432 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HNRNPA1-008 | OTTHUMT00000405475.1 | 857 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HNRNPA1-006 | OTTHUMT00000405477.1 | 1234 | 320aa | OTTHUMP00000241884 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS41793 | A0A024RB53 | |
HNRNPA1-022 | OTTHUMT00000405744.1 | 372 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HNRNPA1-021 | OTTHUMT00000405743.1 | 925 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HNRNPA1-016 | OTTHUMT00000405736.1 | 920 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HNRNPA1-020 | OTTHUMT00000405742.1 | 359 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |