Description
activating transcription factor 7
Synonyms
ATFA
Location
Chromosome 12: 53,507,856-53,626,410 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 13 transcripts (splice variants), 4 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ATF7-001 | OTTHUMT00000405834.3 | 6680 | 483aa | OTTHUMP00000242069 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44906 | P17544 | |
| ATF7-006 | OTTHUMT00000460675.1 | 5218 | 483aa | OTTHUMP00000269004 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44906 | P17544 | |
| ATF7-002 | OTTHUMT00000405837.3 | 860 | 117aa | OTTHUMP00000250060 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58238 | - | |
| ATF7-009 | OTTHUMT00000460677.1 | 774 | 117aa | OTTHUMP00000269006 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58238 | - | |
| ATF7-007 | OTTHUMT00000406302.2 | 1892 | 494aa | OTTHUMP00000242319 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | P17544 | |
| ATF7-010 | OTTHUMT00000460676.2 | 531 | 79aa | OTTHUMP00000269005 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATF7-011 | OTTHUMT00000460686.2 | 531 | 163aa | OTTHUMP00000269008 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ESA4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATF7-005 | OTTHUMT00000405836.4 | 473 | 78aa | OTTHUMP00000242070 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATF7-012 | OTTHUMT00000460685.1 | 1382 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ATF7-003 | OTTHUMT00000405835.1 | 1125 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATF7-004 | OTTHUMT00000405833.1 | 576 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATF7-008 | OTTHUMT00000406303.1 | 470 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATF7-013 | OTTHUMT00000460687.1 | 379 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
