Description
synovial sarcoma translocation, chromosome 18
Synonyms
SYT
Location
Chromosome 18: 26,016,253-26,091,217 reverse strand.
VEGA68:CM000680.2
About this gene
This gene has 26 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SS18-003 | OTTHUMT00000446226.2 | 3414 | 418aa | OTTHUMP00000261334 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32807 | Q15532 | |
| SS18-002 | OTTHUMT00000446227.1 | 2321 | 395aa | OTTHUMP00000261335 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77168 | - | |
| SS18-001 | OTTHUMT00000446230.1 | 1836 | 387aa | OTTHUMP00000261338 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54183 | Q15532 | |
| SS18-023 | OTTHUMT00000446239.2 | 663 | 130aa | OTTHUMP00000261344 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SS18-024 | OTTHUMT00000446237.2 | 646 | 152aa | OTTHUMP00000261342 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SS18-022 | OTTHUMT00000446242.2 | 588 | 70aa | OTTHUMP00000261347 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SS18-004 | OTTHUMT00000446228.1 | 1840 | 58aa | OTTHUMP00000261336 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-007 | OTTHUMT00000446229.1 | 1548 | 61aa | OTTHUMP00000261337 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-005 | OTTHUMT00000446231.1 | 1545 | 84aa | OTTHUMP00000261339 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-006 | OTTHUMT00000446234.1 | 977 | 41aa | OTTHUMP00000261340 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-014 | OTTHUMT00000446236.1 | 756 | 60aa | OTTHUMP00000261341 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-009 | OTTHUMT00000446244.1 | 585 | 35aa | OTTHUMP00000261349 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-026 | OTTHUMT00000446238.1 | 580 | 55aa | OTTHUMP00000261343 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-010 | OTTHUMT00000446240.1 | 575 | 45aa | OTTHUMP00000261345 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-016 | OTTHUMT00000446245.1 | 571 | 60aa | OTTHUMP00000261350 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-018 | OTTHUMT00000446248.1 | 547 | 60aa | OTTHUMP00000261352 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-019 | OTTHUMT00000446249.1 | 545 | 58aa | OTTHUMP00000261353 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-017 | OTTHUMT00000446241.1 | 531 | 94aa | OTTHUMP00000261346 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-011 | OTTHUMT00000446243.1 | 510 | 68aa | OTTHUMP00000261348 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SS18-025 | OTTHUMT00000446235.1 | 774 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SS18-008 | OTTHUMT00000446246.1 | 580 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SS18-021 | OTTHUMT00000446250.1 | 406 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SS18-015 | OTTHUMT00000446251.1 | 375 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SS18-027 | OTTHUMT00000446233.1 | 215 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SS18-013 | OTTHUMT00000446232.1 | 775 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SS18-012 | OTTHUMT00000446247.1 | 609 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
