Description
vacuole membrane protein 1
Synonyms
TANGO5, EPG3
Location
Chromosome 17: 59,707,192-59,842,255 forward strand.
VEGA68:CM000679.2
About this gene
This gene has 17 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| VMP1-001 | OTTHUMT00000448793.1 | 2712 | 406aa | OTTHUMP00000262880 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11619 | Q96GC9 | |
| VMP1-003 | OTTHUMT00000448801.1 | 800 | 138aa | OTTHUMP00000262887 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EMI0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VMP1-014 | OTTHUMT00000448804.1 | 791 | 225aa | OTTHUMP00000262890 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EPE7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| VMP1-007 | OTTHUMT00000448802.2 | 606 | 92aa | OTTHUMP00000262888 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EK01 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VMP1-008 | OTTHUMT00000448797.2 | 583 | 44aa | OTTHUMP00000262884 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VMP1-017 | OTTHUMT00000448799.3 | 580 | 167aa | OTTHUMP00000262885 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ELS2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VMP1-006 | OTTHUMT00000448800.2 | 341 | 78aa | OTTHUMP00000262886 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ENU2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| VMP1-015 | OTTHUMT00000448803.1 | 838 | 58aa | OTTHUMP00000262889 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| VMP1-010 | OTTHUMT00000448794.1 | 558 | 74aa | OTTHUMP00000262881 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| VMP1-009 | OTTHUMT00000448796.1 | 545 | 75aa | OTTHUMP00000262883 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| VMP1-011 | OTTHUMT00000448795.1 | 544 | 44aa | OTTHUMP00000262882 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| VMP1-013 | OTTHUMT00000448806.1 | 884 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VMP1-016 | OTTHUMT00000448805.1 | 729 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VMP1-002 | OTTHUMT00000448792.1 | 231 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VMP1-004 | OTTHUMT00000448807.1 | 4325 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| VMP1-012 | OTTHUMT00000448808.1 | 995 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| VMP1-005 | OTTHUMT00000448798.1 | 587 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
