Description
ATG4 autophagy related 4 homolog D (S. cerevisiae)
Synonyms
APG4-D
Location
Chromosome 19: 10,543,895-10,553,418 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 12 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ATG4D-001 | OTTHUMT00000452022.1 | 1949 | 474aa | OTTHUMP00000264678 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12241 | Q86TL0 | |
| ATG4D-010 | OTTHUMT00000452028.1 | 632 | 177aa | OTTHUMP00000264684 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EN30 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG4D-007 | OTTHUMT00000452024.2 | 628 | 209aa | OTTHUMP00000264680 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EP43 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ATG4D-009 | OTTHUMT00000452027.1 | 607 | 203aa | OTTHUMP00000264683 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ESM7 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ATG4D-008 | OTTHUMT00000452025.2 | 529 | 177aa | OTTHUMP00000264681 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EJA5 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ATG4D-011 | OTTHUMT00000452029.1 | 377 | 99aa | OTTHUMP00000264685 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQ67 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG4D-002 | OTTHUMT00000452018.1 | 1752 | 160aa | OTTHUMP00000264675 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ATG4D-005 | OTTHUMT00000452023.1 | 1619 | 228aa | OTTHUMP00000264679 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7EPJ0 | |
| ATG4D-003 | OTTHUMT00000452020.1 | 1555 | 334aa | OTTHUMP00000264676 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7ERK1 | |
| ATG4D-006 | OTTHUMT00000452026.1 | 931 | 67aa | OTTHUMP00000264682 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7EMB9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATG4D-012 | OTTHUMT00000452021.1 | 729 | 120aa | OTTHUMP00000264677 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ATG4D-004 | OTTHUMT00000452019.1 | 1282 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
