Description
beclin 1, autophagy related
Synonyms
ATG6, VPS30
Location
Chromosome 17: 42,810,134-42,833,350 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 22 transcripts (splice variants), 4 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| BECN1-002 | OTTHUMT00000452405.1 | 2112 | 450aa | OTTHUMP00000264882 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11441 | Q14457 | |
| BECN1-001 | OTTHUMT00000452407.1 | 2087 | 450aa | OTTHUMP00000264883 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11441 | Q14457 | |
| BECN1-003 | OTTHUMT00000452409.1 | 1569 | 279aa | OTTHUMP00000264885 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82132 | E7EV84 | |
| BECN1-018 | OTTHUMT00000452408.1 | 854 | 109aa | OTTHUMP00000264884 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| BECN1-021 | OTTHUMT00000452410.1 | 769 | 106aa | OTTHUMP00000264886 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EMA2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| BECN1-019 | OTTHUMT00000452415.1 | 731 | 229aa | OTTHUMP00000264889 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ELY9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| BECN1-012 | OTTHUMT00000452419.2 | 629 | 176aa | OTTHUMP00000264892 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EN35 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BECN1-015 | OTTHUMT00000452418.1 | 570 | 72aa | OTTHUMP00000264891 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ERY0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| BECN1-008 | OTTHUMT00000452425.2 | 561 | 59aa | OTTHUMP00000264894 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQQ7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BECN1-009 | OTTHUMT00000452426.5 | 559 | 20aa | OTTHUMP00000276633 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| BECN1-017 | OTTHUMT00000452412.1 | 489 | 132aa | OTTHUMP00000264887 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ER46 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| BECN1-010 | OTTHUMT00000452421.1 | 559 | 76aa | OTTHUMP00000264893 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7EKK2 | |
| BECN1-020 | OTTHUMT00000452413.2 | 524 | 55aa | OTTHUMP00000264888 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| BECN1-013 | OTTHUMT00000452416.1 | 475 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| BECN1-005 | OTTHUMT00000452406.1 | 4865 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BECN1-004 | OTTHUMT00000452411.1 | 2504 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BECN1-007 | OTTHUMT00000452423.1 | 744 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BECN1-014 | OTTHUMT00000452420.1 | 719 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BECN1-011 | OTTHUMT00000452422.1 | 636 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BECN1-016 | OTTHUMT00000452417.1 | 597 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BECN1-022 | OTTHUMT00000452414.1 | 581 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| BECN1-006 | OTTHUMT00000452424.1 | 557 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
