Description
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
Synonyms
FLJ20244, TRM1
Location
Chromosome 19: 13,104,907-13,117,567 reverse strand.
VEGA68:CM000681.2
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TRMT1-001 | OTTHUMT00000452780.2 | 2579 | 659aa | OTTHUMP00000265115 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12293 | A0A024R7I5 | |
| TRMT1-002 | OTTHUMT00000452778.2 | 2179 | 630aa | OTTHUMP00000265114 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45997 | - | |
| TRMT1-019 | OTTHUMT00000452813.1 | 985 | 297aa | OTTHUMP00000265170 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQQ8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TRMT1-012 | OTTHUMT00000452812.2 | 813 | 191aa | OTTHUMP00000265169 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EJX9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TRMT1-020 | OTTHUMT00000452825.2 | 552 | 145aa | OTTHUMP00000265175 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQU7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TRMT1-015 | OTTHUMT00000452814.1 | 648 | 101aa | OTTHUMP00000265171 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TRMT1-007 | OTTHUMT00000452816.1 | 582 | 105aa | OTTHUMP00000265172 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7ENI9 | |
| TRMT1-011 | OTTHUMT00000452820.1 | 562 | 85aa | OTTHUMP00000265173 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7EQY6 | |
| TRMT1-008 | OTTHUMT00000452821.1 | 543 | 113aa | OTTHUMP00000265174 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7ERR5 | |
| TRMT1-009 | OTTHUMT00000452822.1 | 554 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRMT1-013 | OTTHUMT00000452819.1 | 543 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRMT1-021 | OTTHUMT00000452817.1 | 522 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRMT1-010 | OTTHUMT00000452818.1 | 454 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRMT1-014 | OTTHUMT00000452815.1 | 408 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRMT1-004 | OTTHUMT00000452781.1 | 2251 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TRMT1-003 | OTTHUMT00000452779.1 | 2127 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TRMT1-018 | OTTHUMT00000452823.1 | 799 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TRMT1-005 | OTTHUMT00000452824.1 | 612 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TRMT1-006 | OTTHUMT00000452826.1 | 592 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TRMT1-016 | OTTHUMT00000452810.1 | 437 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TRMT1-017 | OTTHUMT00000452811.1 | 354 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
