Description
zinc finger protein 540
Synonyms
DKFZp547B0714
Location
Chromosome 19: 37,551,406-37,614,097 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 10 transcripts (splice variants), 19 orthologues and 18 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ZNF540-009 | OTTHUMT00000459481.1 | 3147 | 660aa | OTTHUMP00000268393 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12506 | Q8NDQ6 | |
| ZNF540-002 | OTTHUMT00000459022.1 | 3099 | 660aa | OTTHUMP00000268227 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12506 | Q8NDQ6 | |
| ZNF540-004 | OTTHUMT00000459026.1 | 3073 | 660aa | OTTHUMP00000268231 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12506 | Q8NDQ6 | |
| ZNF540-001 | OTTHUMT00000459019.1 | 2349 | 628aa | OTTHUMP00000268225 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54258 | - | |
| ZNF540-003 | OTTHUMT00000459024.2 | 2038 | 552aa | OTTHUMP00000268229 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EK80 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ZNF540-005 | OTTHUMT00000459025.1 | 564 | 29aa | OTTHUMP00000268230 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| ZNF540-008 | OTTHUMT00000459023.2 | 563 | 100aa | OTTHUMP00000268228 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQ46 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ZNF540-007 | OTTHUMT00000459020.2 | 576 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ZNF540-006 | OTTHUMT00000459021.1 | 575 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ZNF540-010 | OTTHUMT00000459482.1 | 3106 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
