Description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
Synonyms
BAT1L, DDXL, URH49
Location
Chromosome 19: 14,408,819-14,419,380 reverse strand.
VEGA68:CM000681.2
About this gene
This gene has 20 transcripts (splice variants), 8 orthologues and 7 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| DDX39A-001 | OTTHUMT00000459880.1 | 1471 | 427aa | OTTHUMP00000268582 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12308 | O00148 | |
| DDX39A-012 | OTTHUMT00000459884.1 | 829 | 255aa | OTTHUMP00000268583 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQN7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| DDX39A-010 | OTTHUMT00000459891.2 | 585 | 125aa | OTTHUMP00000268586 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EIL8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| DDX39A-015 | OTTHUMT00000459886.2 | 566 | 189aa | OTTHUMP00000268584 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EPJ3 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| DDX39A-007 | OTTHUMT00000459890.2 | 565 | 130aa | OTTHUMP00000268585 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EN69 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| DDX39A-009 | OTTHUMT00000459895.2 | 563 | 92aa | OTTHUMP00000268589 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| DDX39A-008 | OTTHUMT00000459894.2 | 484 | 108aa | OTTHUMP00000268588 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EL56 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| DDX39A-004 | OTTHUMT00000459879.1 | 1478 | 267aa | OTTHUMP00000268581 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| DDX39A-020 | OTTHUMT00000459900.1 | 1355 | 322aa | OTTHUMP00000268590 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| DDX39A-018 | OTTHUMT00000459881.2 | 823 | 96aa | OTTHUMP00000278817 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0D9SEM9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| DDX39A-011 | OTTHUMT00000459893.1 | 538 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| DDX39A-003 | OTTHUMT00000459878.1 | 1903 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-005 | OTTHUMT00000459877.1 | 1813 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-017 | OTTHUMT00000459883.1 | 1297 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-002 | OTTHUMT00000459889.1 | 1127 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-019 | OTTHUMT00000459882.2 | 1080 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-006 | OTTHUMT00000459888.1 | 988 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-014 | OTTHUMT00000459885.1 | 657 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-013 | OTTHUMT00000459892.1 | 586 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX39A-016 | OTTHUMT00000459887.1 | 575 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
