Description
suppressor of Ty 5 homolog (S. cerevisiae)
Synonyms
FLJ34157, SPT5H, SPT5
Location
Chromosome 19: 39,436,156-39,476,670 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 20 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SUPT5H-002 | OTTHUMT00000464918.1 | 3902 | 1087aa | OTTHUMP00000270775 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12536 | O00267 | |
SUPT5H-001 | OTTHUMT00000464517.2 | 3770 | 1083aa | OTTHUMP00000270597 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46072 | - | |
SUPT5H-006 | OTTHUMT00000464925.1 | 3742 | 1087aa | OTTHUMP00000270778 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12536 | O00267 | |
SUPT5H-008 | OTTHUMT00000464917.2 | 558 | 54aa | OTTHUMP00000270774 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SUPT5H-016 | OTTHUMT00000464927.2 | 493 | 164aa | OTTHUMP00000270779 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
SUPT5H-009 | OTTHUMT00000464919.1 | 396 | 102aa | OTTHUMP00000270776 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SUPT5H-011 | OTTHUMT00000464923.1 | 364 | 102aa | OTTHUMP00000270777 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SUPT5H-003 | OTTHUMT00000464922.1 | 3547 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SUPT5H-005 | OTTHUMT00000464921.1 | 2842 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SUPT5H-021 | OTTHUMT00000474447.1 | 467 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SUPT5H-007 | OTTHUMT00000464931.1 | 3796 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-015 | OTTHUMT00000464929.1 | 859 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-018 | OTTHUMT00000464932.1 | 859 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-020 | OTTHUMT00000464934.1 | 718 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-004 | OTTHUMT00000464920.1 | 659 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-013 | OTTHUMT00000464926.1 | 548 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-012 | OTTHUMT00000464924.1 | 538 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-017 | OTTHUMT00000464930.1 | 514 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-019 | OTTHUMT00000464933.1 | 323 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SUPT5H-014 | OTTHUMT00000464928.1 | 238 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |