Description
regulatory factor X, 5 (influences HLA class II expression)
Location
Chromosome 1: 151,343,749-151,347,021 reverse strand.
About this transcript
This transcript has 9 exons and is annotated with 7 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000012495 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
RFX5-001 | OTTHUMT00000034892.6 | 3576 | 616aa | OTTHUMP00000082795 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS994 | P48382 | |
RFX5-020 | OTTHUMT00000316353.1 | 2459 | 616aa | OTTHUMP00000196318 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS994 | P48382 | |
RFX5-002 | OTTHUMT00000034893.4 | 2355 | 616aa | OTTHUMP00000014465 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS994 | P48382 | |
RFX5-008 | OTTHUMT00000156127.6 | 2056 | 596aa | OTTHUMP00000082796 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8W689 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-003 | OTTHUMT00000034894.3 | 903 | 184aa | OTTHUMP00000196320 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6UE82 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-004 | OTTHUMT00000034895.4 | 902 | 229aa | OTTHUMP00000196321 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A0MSQ2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-010 | OTTHUMT00000156129.7 | 765 | 235aa | OTTHUMP00000081738 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y4B4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
RFX5-011 | OTTHUMT00000316344.2 | 597 | 105aa | OTTHUMP00000196315 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A0MT34 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-012 | OTTHUMT00000316345.2 | 585 | 123aa | OTTHUMP00000196316 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6X9D6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-005 | OTTHUMT00000034896.18 | 562 | 117aa | OTTHUMP00000196322 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A0MSM9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-021 | OTTHUMT00000316354.2 | 545 | 96aa | OTTHUMP00000196319 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6S3S0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-009 | OTTHUMT00000156128.6 | 537 | 165aa | OTTHUMP00000081737 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6R6G4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RFX5-014 | OTTHUMT00000316347.3 | 596 | 50aa | OTTHUMP00000199557 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F2Z2G0 | |
RFX5-018 | OTTHUMT00000316351.3 | 583 | 42aa | OTTHUMP00000199559 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
RFX5-013 | OTTHUMT00000316346.4 | 567 | 50aa | OTTHUMP00000199556 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F2Z2G0 | |
RFX5-017 | OTTHUMT00000316350.4 | 558 | 44aa | OTTHUMP00000199558 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
RFX5-019 | OTTHUMT00000316352.2 | 555 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
RFX5-016 | OTTHUMT00000316349.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
RFX5-015 | OTTHUMT00000316348.1 | 583 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
RFX5-007 | OTTHUMT00000034898.2 | 519 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
RFX5-006 | OTTHUMT00000034897.2 | 396 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |