Description
neurexin 1
Location
Chromosome 2: 49,921,586-50,346,832 reverse strand.
About this transcript
This transcript has 7 exons and is annotated with 5 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000129263 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
NRXN1-001 | OTTHUMT00000325291.3 | 9375 | 1477aa | OTTHUMP00000201211 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54360 | Q9ULB1 | |
NRXN1-018 | OTTHUMT00000481060.2 | 8113 | 1496aa | OTTHUMP00000278417 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82450 | A0A0D9SEP4 | |
NRXN1-002 | OTTHUMT00000323894.3 | 7578 | 1547aa | OTTHUMP00000200525 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46282 | - | |
NRXN1-003 | OTTHUMT00000325104.4 | 5870 | 1507aa | OTTHUMP00000201119 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82451 | E7ERL8 | |
NRXN1-024 | OTTHUMT00000481155.1 | 4500 | 1499aa | OTTHUMP00000278425 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82449 | - | |
NRXN1-012 | OTTHUMT00000251372.3 | 3315 | 442aa | OTTHUMP00000159578 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1845 | P58400 | |
NRXN1-020 | OTTHUMT00000481149.1 | 2873 | 472aa | OTTHUMP00000278422 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82446 | E7ETA5 | |
NRXN1-019 | OTTHUMT00000481154.1 | 2444 | 469aa | OTTHUMP00000278424 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82447 | A0A0D9SEM5 | |
NRXN1-011 | OTTHUMT00000323984.5 | 2215 | 139aa | OTTHUMP00000278397 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82445 | H0Y568 | |
NRXN1-016 | OTTHUMT00000325296.4 | 1338 | 142aa | OTTHUMP00000201216 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82444 | H0Y568 | |
NRXN1-010 | OTTHUMT00000325293.7 | 5724 | 1495aa | OTTHUMP00000228853 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0R4J2G7 | |
NRXN1-004 | OTTHUMT00000323978.4 | 5078 | 278aa | OTTHUMP00000201381 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
NRXN1-048 | OTTHUMT00000490596.1 | 3651 | 293aa | OTTHUMP00000282761 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
NRXN1-049 | OTTHUMT00000490591.1 | 3595 | 143aa | OTTHUMP00000282758 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GTL0 | |
NRXN1-039 | OTTHUMT00000488619.1 | 3553 | 62aa | OTTHUMP00000281539 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
NRXN1-028 | OTTHUMT00000481158.1 | 3243 | 459aa | OTTHUMP00000278427 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0D9SFF4 | |
NRXN1-046 | OTTHUMT00000490595.1 | 2832 | 155aa | OTTHUMP00000282760 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
NRXN1-007 | OTTHUMT00000480573.1 | 2543 | 277aa | OTTHUMP00000278395 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
NRXN1-013 | OTTHUMT00000480578.2 | 1164 | 176aa | OTTHUMP00000281541 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQP8 | |
NRXN1-023 | OTTHUMT00000481153.1 | 837 | 75aa | OTTHUMP00000278423 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0D9SFY6 | |
NRXN1-015 | OTTHUMT00000325295.2 | 641 | 213aa | OTTHUMP00000201215 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0D9SF36 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
NRXN1-025 | OTTHUMT00000481161.1 | 518 | 136aa | OTTHUMP00000278428 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
NRXN1-008 | OTTHUMT00000325604.2 | 506 | 169aa | OTTHUMP00000278398 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0D9SF07 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
NRXN1-005 | OTTHUMT00000323979.4 | 464 | 126aa | OTTHUMP00000278396 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
NRXN1-059 | OTTHUMT00000490965.1 | 100 | 33aa | OTTHUMP00000282893 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
NRXN1-021 | OTTHUMT00000481151.1 | 1857 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
NRXN1-022 | OTTHUMT00000481152.1 | 1494 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
NRXN1-006 | OTTHUMT00000323980.3 | 3044 | 903aa | OTTHUMP00000281540 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0U1RRK7 | |
NRXN1-029 | OTTHUMT00000481157.2 | 1823 | 56aa | OTTHUMP00000278426 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
NRXN1-045 | OTTHUMT00000490592.1 | 1679 | 123aa | OTTHUMP00000282759 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A1B0GUQ1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
NRXN1-041 | OTTHUMT00000488618.1 | 3692 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-040 | OTTHUMT00000488617.1 | 3674 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-032 | OTTHUMT00000488545.1 | 3321 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-047 | OTTHUMT00000490594.1 | 3010 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-050 | OTTHUMT00000490593.1 | 2717 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-038 | OTTHUMT00000488620.1 | 2249 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-037 | OTTHUMT00000488621.1 | 1282 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-033 | OTTHUMT00000488622.1 | 1246 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-027 | OTTHUMT00000481159.2 | 796 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-042 | OTTHUMT00000490566.1 | 789 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-031 | OTTHUMT00000481150.1 | 757 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-044 | OTTHUMT00000490567.1 | 754 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-034 | OTTHUMT00000324134.5 | 736 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-043 | OTTHUMT00000490568.1 | 736 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-036 | OTTHUMT00000488623.1 | 715 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-035 | OTTHUMT00000324131.5 | 637 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-017 | OTTHUMT00000325297.3 | 623 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-026 | OTTHUMT00000481160.1 | 574 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-057 | OTTHUMT00000490967.1 | 121 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-051 | OTTHUMT00000490972.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-053 | OTTHUMT00000490973.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-054 | OTTHUMT00000490970.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-055 | OTTHUMT00000490969.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-056 | OTTHUMT00000490968.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-058 | OTTHUMT00000490964.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-060 | OTTHUMT00000490966.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-061 | OTTHUMT00000490963.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-062 | OTTHUMT00000490962.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-064 | OTTHUMT00000490960.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-065 | OTTHUMT00000490959.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-066 | OTTHUMT00000490958.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-067 | OTTHUMT00000490957.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-052 | OTTHUMT00000490971.1 | 94 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
NRXN1-014 | OTTHUMT00000325294.2 | 574 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
NRXN1-009 | OTTHUMT00000325603.1 | 490 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
NRXN1-030 | OTTHUMT00000481156.1 | 360 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |