Description
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Location
Chromosome 11: 70,348,280-70,375,093 forward strand.
About this transcript
This transcript has 9 exons.
Gene
This transcript is a product of gene OTTHUMG00000167266 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
PPFIA1-001 | OTTHUMT00000393905.1 | 5234 | 1202aa | OTTHUMP00000235552 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31627 | Q13136 | |
PPFIA1-002 | OTTHUMT00000393906.1 | 4133 | 1185aa | OTTHUMP00000235553 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31628 | - | |
PPFIA1-018 | OTTHUMT00000393920.2 | 1168 | 389aa | OTTHUMP00000235562 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
PPFIA1-026 | OTTHUMT00000489173.1 | 814 | 271aa | OTTHUMP00000281842 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
PPFIA1-023 | OTTHUMT00000393929.1 | 745 | 98aa | OTTHUMP00000235566 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YDZ8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PPFIA1-013 | OTTHUMT00000393914.2 | 710 | 237aa | OTTHUMP00000235558 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
PPFIA1-008 | OTTHUMT00000393908.2 | 575 | 158aa | OTTHUMP00000235555 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
PPFIA1-009 | OTTHUMT00000393909.2 | 563 | 99aa | OTTHUMP00000235556 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
PPFIA1-005 | OTTHUMT00000393922.1 | 1299 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
PPFIA1-003 | OTTHUMT00000393907.1 | 5159 | 583aa | OTTHUMP00000235554 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
PPFIA1-004 | OTTHUMT00000393910.1 | 4537 | 387aa | OTTHUMP00000235557 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PPFIA1-021 | OTTHUMT00000393923.1 | 879 | 46aa | OTTHUMP00000235564 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PPFIA1-014 | OTTHUMT00000393915.1 | 564 | 97aa | OTTHUMP00000235559 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PPFIA1-019 | OTTHUMT00000393921.1 | 553 | 33aa | OTTHUMP00000235563 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PPFIA1-006 | OTTHUMT00000393926.1 | 3774 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-017 | OTTHUMT00000393917.1 | 977 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-016 | OTTHUMT00000393916.2 | 862 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-012 | OTTHUMT00000393913.1 | 587 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-020 | OTTHUMT00000393918.1 | 573 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-015 | OTTHUMT00000393919.1 | 568 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-010 | OTTHUMT00000393911.1 | 536 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-025 | OTTHUMT00000393927.1 | 358 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PPFIA1-007 | OTTHUMT00000393928.1 | 3036 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PPFIA1-022 | OTTHUMT00000393924.1 | 598 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PPFIA1-024 | OTTHUMT00000393925.1 | 550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
PPFIA1-011 | OTTHUMT00000393912.1 | 514 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |