Transcript: SMURF2-002 OTTHUMT00000445228.2

Description

SMAD specific E3 ubiquitin protein ligase 2

Location

Chromosome 17: 64,554,881-64,661,912 reverse strand.

About this transcript

This transcript has 14 exons and is annotated with 31 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000179189 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMURF2-001	OTTHUMT00000445227.1	2918	748aa	OTTHUMP00000260900	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32707	Q9HAU4
SMURF2-002	OTTHUMT00000445228.2	1716	561aa	OTTHUMP00000260901	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QQM4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SMURF2-003	OTTHUMT00000445225.1	5892	55aa	OTTHUMP00000260898	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SMURF2-004	OTTHUMT00000445226.1	3104	68aa	OTTHUMP00000260899	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SMURF2-007	OTTHUMT00000445230.1	339	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SMURF2-005	OTTHUMT00000445231.1	623	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SMURF2-006	OTTHUMT00000445229.1	581	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 1,716 bps Translation length: 561 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 13/02/2012)

Alternative symbols

RP11-87N3.4-002

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 64,554,881-64,661,912 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000585301

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SMURF2-002 OTTHUMT00000445228.2

Summary

Transcript-based displays