Transcript: KAZN-009 OTTHUMT00000489915.1

Description

kazrin, periplakin interacting protein

Location

Chromosome 1: 13,892,792-14,304,663 forward strand.

About this transcript

This transcript has 3 exons.

Gene

This transcript is a product of gene OTTHUMG00000002042 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
KAZN-001	OTTHUMT00000005690.3	6030	775aa	OTTHUMP00000002026	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS152	Q674X7
KAZN-003	OTTHUMT00000005692.2	3838	415aa	OTTHUMP00000002028	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30604	-
KAZN-006	OTTHUMT00000367920.2	1475	421aa	OTTHUMP00000221581	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41267	-
KAZN-007	OTTHUMT00000367921.1	1295	327aa	OTTHUMP00000221582	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41268	-
KAZN-008	OTTHUMT00000491024.1	6874	863aa	OTTHUMP00000282910	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
KAZN-009	OTTHUMT00000489915.1	1197	105aa	OTTHUMP00000282376	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
KAZN-005	OTTHUMT00000005694.3	800	166aa	OTTHUMP00000002029	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
KAZN-004	OTTHUMT00000005693.1	5595	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
KAZN-002	OTTHUMT00000005691.2	5592	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 1,197 bps Translation length: 105 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 14/03/2016 (Created on 19/01/2016)

Alternative symbols

RP1-21O18.1-009

Annotation Attributes

not organism-supported [Definitions]

RNA-Seq supported partial

Remarks

upstream ATG

Other assemblies

This transcript maps to 13,892,792-14,304,663 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000636564

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: KAZN-009 OTTHUMT00000489915.1

Summary

Transcript-based displays