Transcript: SEP15-004 OTTHUMT00000023521.2

Description

15 kDa selenoprotein

Location

About this transcript

This transcript has 4 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SEP15-001	OTTHUMT00000023518.3	1781	165aa	OTTHUMP00000010189	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76178	O60613
SEP15-002	OTTHUMT00000023519.2	1220	124aa	OTTHUMP00000010190	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76177	-
SEP15-005	OTTHUMT00000023522.4	727	144aa	OTTHUMP00000010191	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SEP15-006	OTTHUMT00000023523.3	266	88aa	OTTHUMP00000281117	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SEP15-004	OTTHUMT00000023521.2	499	31aa	OTTHUMP00000281118	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SEP15-003	OTTHUMT00000023520.1	831	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 499 bps Translation length: 31 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 23/02/2015 (Created on 07/01/2004)

Alternative symbols

RP4-604K5.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 86,868,096-86,914,065 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000467557

Curation Method

Manual annotation from Havana