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Description

EF-hand domain (C-terminal) containing 1

Location
About this transcript

This transcript has 11 exons and is annotated with 15 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
EFHC1-001OTTHUMT00000040905.56987640aaOTTHUMP00000016605
 
Protein coding
CCDS4942B2CKC5
EFHC1-034OTTHUMT00000489981.12421621aaOTTHUMP00000282420
 
Protein coding
CCDS55021-
EFHC1-008OTTHUMT00000489923.12129621aaOTTHUMP00000282382
 
Protein coding
CCDS55021-
EFHC1-038OTTHUMT00000489982.13829641aaOTTHUMP00000282421
 
Protein coding
-A0A1B0GVB0
EFHC1-020OTTHUMT00000489941.33530582aaOTTHUMP00000282397
 
Protein coding
--
EFHC1-037OTTHUMT00000489980.13293474aaOTTHUMP00000282419
 
Protein coding
--
EFHC1-033OTTHUMT00000489984.12965518aaOTTHUMP00000282424
 
Protein coding
-A0A1B0GUP6 CDS 5' incomplete
EFHC1-027OTTHUMT00000489947.12548632aaOTTHUMP00000282400
 
Protein coding
-A0A1B0GUV2
EFHC1-028OTTHUMT00000489950.22197630aaOTTHUMP00000282402
 
Protein coding
-A0A1B0GTB1
EFHC1-023OTTHUMT00000489944.12133631aaOTTHUMP00000282399
 
Protein coding
-A0A1B0GTV6
EFHC1-019OTTHUMT00000489943.22089552aaOTTHUMP00000282398
 
Protein coding
--
EFHC1-015OTTHUMT00000489936.22030532aaOTTHUMP00000282393
 
Protein coding
-A0A1B0GTM7
EFHC1-024OTTHUMT00000489948.11829544aaOTTHUMP00000282401
 
Protein coding
-A0A1B0GVR3
EFHC1-009OTTHUMT00000489919.2552148aaOTTHUMP00000282379
 
Protein coding
--CDS 3' incomplete
EFHC1-017OTTHUMT00000489939.155276aaOTTHUMP00000282395
 
Protein coding
--CDS 3' incomplete
EFHC1-010OTTHUMT00000489925.154012aaOTTHUMP00000282383
 
Protein coding
--CDS 3' incomplete
EFHC1-004OTTHUMT00000040908.32549559aaOTTHUMP00000282422
 
Nonsense mediated decay
--
EFHC1-031OTTHUMT00000489983.12539243aaOTTHUMP00000282423
 
Nonsense mediated decay
--
EFHC1-011OTTHUMT00000489920.2230197aaOTTHUMP00000282380
 
Nonsense mediated decay
--
EFHC1-005OTTHUMT00000489916.2202070aaOTTHUMP00000282377
 
Nonsense mediated decay
--
EFHC1-003OTTHUMT00000040907.3189697aaOTTHUMP00000282372
 
Nonsense mediated decay
--
EFHC1-029OTTHUMT00000489951.11703132aaOTTHUMP00000282403
 
Nonsense mediated decay
--CDS 5' incomplete
EFHC1-012OTTHUMT00000489921.1507112aaOTTHUMP00000282381
 
Nonsense mediated decay
--
EFHC1-018OTTHUMT00000489940.149032aaOTTHUMP00000282396
 
Nonsense mediated decay
--CDS 5' incomplete
EFHC1-030OTTHUMT00000489979.12746No protein-
 
Processed transcript
--
EFHC1-021OTTHUMT00000489942.22635No protein-
 
Processed transcript
--
EFHC1-007OTTHUMT00000489917.11897No protein-
 
Processed transcript
--
EFHC1-025OTTHUMT00000489949.2939No protein-
 
Processed transcript
--
EFHC1-006OTTHUMT00000489918.2714No protein-
 
Processed transcript
--
EFHC1-014OTTHUMT00000489924.1557No protein-
 
Processed transcript
--
EFHC1-016OTTHUMT00000489935.1496No protein-
 
Processed transcript
--
EFHC1-013OTTHUMT00000489922.1452No protein-
 
Processed transcript
--
EFHC1-022OTTHUMT00000489945.1387No protein-
 
Processed transcript
--
EFHC1-035OTTHUMT00000489987.14308No protein-
 
Retained intron
--
EFHC1-002OTTHUMT00000040906.44004No protein-
 
Retained intron
--
EFHC1-026OTTHUMT00000489946.13509No protein-
 
Retained intron
--
EFHC1-032OTTHUMT00000489986.12786No protein-
 
Retained intron
--
EFHC1-036OTTHUMT00000489985.11636No protein-
 
Retained intron
--
Statistics

Exons: 11 Transcript length: 3,829 bps Translation length: 641 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 22/01/2016 (Created on 22/01/2016)

Alternative symbols

RP1-180E22.1-038

Annotation Attributes

RNA-Seq supported only [Definitions]

Other assemblies

This transcript maps to 52,420,291-52,524,741 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays