Transcript: PRDM1-007 OTTHUMT00000327268.2

Description

PR domain containing 1, with ZNF domain

Location

About this transcript

This transcript has 3 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRDM1-001	OTTHUMT00000041661.3	5164	825aa	OTTHUMP00000016918	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5054	Q5T4E8
PRDM1-002	OTTHUMT00000041662.2	4675	691aa	OTTHUMP00000016919	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34505	-
PRDM1-004	OTTHUMT00000327265.1	2612	789aa	OTTHUMP00000202173	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5T4E8
PRDM1-006	OTTHUMT00000327267.2	583	63aa	OTTHUMP00000202174	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PRDM1-007	OTTHUMT00000327268.2	583	171aa	OTTHUMP00000202175	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PRDM1-005	OTTHUMT00000327266.1	649	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PRDM1-003	OTTHUMT00000041663.2	580	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 583 bps Translation length: 171 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 15/04/2008)

Alternative symbols

RP1-134E15.1-007

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 106,098,606-106,105,038 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000450060

Curation Method

Manual annotation from Havana