Transcript: CDC40-001 OTTHUMT00000041790.1

Description

cell division cycle 40 homolog (S. cerevisiae)

Location

About this transcript

This transcript has 15 exons and is annotated with 22 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
CDC40-005	OTTHUMT00000041791.2	3933	579aa	OTTHUMP00000016997	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5081	O60508
CDC40-001	OTTHUMT00000041790.1	1977	539aa	OTTHUMP00000016996	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5SRN1
CDC40-006	OTTHUMT00000470494.1	357	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CDC40-003	OTTHUMT00000041792.2	306	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CDC40-007	OTTHUMT00000470493.1	3372	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CDC40-004	OTTHUMT00000041793.1	400	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 1,977 bps Translation length: 539 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 23/05/2003)

Alternative symbols

RP1-71D21.3-001

Remarks

pre-mRNA splicing factor 17 (PRP17, EH binding protein 3, EHB3, CDC40)

pre-mRNA splicing factor 17 (PRP17, EHB3, EH-binding protein 3, CDC40)

Other assemblies

This transcript maps to 110,180,421-110,254,275 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000368930

Curation Method

Manual annotation from Havana