Transcript: AMD1-005 OTTHUMT00000476405.1

Description

adenosylmethionine decarboxylase 1

Location

Chromosome 6: 110,874,785-110,893,982 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000015369 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AMD1-003	OTTHUMT00000041816.1	3438	334aa	OTTHUMP00000017012	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5086	P17707
AMD1-002	OTTHUMT00000041818.1	3040	265aa	OTTHUMP00000017014	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75505	Q5VXN5
AMD1-005	OTTHUMT00000476405.1	1605	265aa	OTTHUMP00000275653	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75505	Q5VXN5
AMD1-001	OTTHUMT00000041817.2	3121	48aa	OTTHUMP00000017013	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6R5I9
AMD1-004	OTTHUMT00000041819.4	782	5aa	OTTHUMP00000017015	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AMD1-006	OTTHUMT00000476406.1	4745	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AMD1-007	OTTHUMT00000476407.1	4329	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,605 bps Translation length: 265 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS75505

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 20/02/2014)

Alternative symbols

RP11-397G5.3-005

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 110,874,785-110,893,982 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000368877

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: AMD1-005 OTTHUMT00000476405.1

Summary

Transcript-based displays