Transcript: TBP-002 OTTHUMT00000043274.2

Description

TATA box binding protein

Location

About this transcript

This transcript has 3 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TBP-001	OTTHUMT00000043271.2	1861	339aa	OTTHUMP00000017703	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5315	P20226
TBP-004	OTTHUMT00000043272.2	935	208aa	OTTHUMP00000017704	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q7Z6S5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TBP-002	OTTHUMT00000043274.2	892	101aa	OTTHUMP00000017706	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y6D8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TBP-003	OTTHUMT00000043273.2	703	150aa	OTTHUMP00000017705	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q7Z6S4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TBP-005	OTTHUMT00000488977.1	1955	248aa	OTTHUMP00000281666	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GVC6

Summary

Statistics

Exons: 3 Transcript length: 892 bps Translation length: 101 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 06/10/2003)

Alternative symbols

RP1-191N21.3-002

Remarks

TATA box binding protein (GTF2D, SCA17, TFIID)

this variant and either of variant fragments dJ191N21.2.2 or dJ191N21.2.1 could be part of one single variant

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 170,569,612-170,572,853 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000446829

Curation Method

Manual annotation from Havana