Transcript: PCDH9-004 OTTHUMT00000476997.1

Description

protocadherin 9

Location

About this transcript

This transcript has 5 exons and is annotated with 54 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PCDH9-002	OTTHUMT00000045215.2	28227	1032aa	OTTHUMP00000018491	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81769	Q5VT82
PCDH9-001	OTTHUMT00000045214.3	6234	1203aa	OTTHUMP00000018490	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9443	Q9HC56
PCDH9-003	OTTHUMT00000276387.3	5709	1237aa	OTTHUMP00000178682	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9444	X5D7N0
PCDH9-004	OTTHUMT00000476997.1	5072	1195aa	OTTHUMP00000276449	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81770	B7ZM79
PCDH9-005	OTTHUMT00000476999.1	461	44aa	OTTHUMP00000276450	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PCDH9-006	OTTHUMT00000476998.1	559	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 5,072 bps Translation length: 1,195 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS81770

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 18/03/2014 (Created on 18/03/2014)

Alternative symbols

RP11-335P18.3-004

Other assemblies

This transcript maps to 66,303,345-67,229,818 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000456367

Curation Method

Manual annotation from Havana