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Description

spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)

About this transcript

This transcript has 2 exons.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SPTAN1-004OTTHUMT00000054472.278892472aaOTTHUMP00000022283
 
Protein coding
CCDS6905Q13813
SPTAN1-005OTTHUMT00000054473.278682477aaOTTHUMP00000022284
 
Protein coding
CCDS48036-
SPTAN1-016OTTHUMT00000481706.177942452aaOTTHUMP00000278504
 
Protein coding
CCDS75914-
SPTAN1-017OTTHUMT00000481705.178122457aaOTTHUMP00000278503
 
Protein coding
-A0A0D9SF54
SPTAN1-019OTTHUMT00000481708.174982498aaOTTHUMP00000278505
 
Protein coding
-A0A0D9SGF6
SPTAN1-021OTTHUMT00000481710.2585153aaOTTHUMP00000278506
 
Protein coding
--CDS 3' incomplete
SPTAN1-028OTTHUMT00000481717.141668aaOTTHUMP00000278507
 
Protein coding
-A0A0D9SFH4 CDS 5' incomplete
SPTAN1-037OTTHUMT00000490316.215251aaOTTHUMP00000282640
 
Protein coding
--CDS 5' and 3' incomplete
SPTAN1-041OTTHUMT00000491025.110012aaOTTHUMP00000282911
 
Protein coding
--CDS 3' incomplete
SPTAN1-042OTTHUMT00000491026.110011aaOTTHUMP00000282912
 
Protein coding
--CDS 3' incomplete
SPTAN1-043OTTHUMT00000491029.110022aaOTTHUMP00000282915
 
Protein coding
--CDS 3' incomplete
SPTAN1-044OTTHUMT00000491028.110012aaOTTHUMP00000282914
 
Protein coding
--CDS 3' incomplete
SPTAN1-015OTTHUMT00000481704.24329No protein-
 
Artifact
--
SPTAN1-018OTTHUMT00000481707.12081No protein-
 
Artifact
--
SPTAN1-031OTTHUMT00000490287.2574103aaOTTHUMP00000282608
 
Nonsense mediated decay
--CDS 5' incomplete
SPTAN1-034OTTHUMT00000490313.119328aaOTTHUMP00000282637
 
Nonsense mediated decay
--CDS 5' incomplete
SPTAN1-035OTTHUMT00000490314.110025aaOTTHUMP00000282638
 
Nonsense mediated decay
--CDS 5' incomplete
SPTAN1-030OTTHUMT00000490286.11496No protein-
 
Processed transcript
--
SPTAN1-032OTTHUMT00000490288.11472No protein-
 
Processed transcript
--
SPTAN1-007OTTHUMT00000054475.2351No protein-
 
Processed transcript
--
SPTAN1-039OTTHUMT00000490318.1100No protein-
 
Processed transcript
--
SPTAN1-029OTTHUMT00000490285.15870No protein-
 
Retained intron
--
SPTAN1-011OTTHUMT00000481699.24102No protein-
 
Retained intron
--
SPTAN1-006OTTHUMT00000054474.12237No protein-
 
Retained intron
--
SPTAN1-020OTTHUMT00000481709.11713No protein-
 
Retained intron
--
SPTAN1-013OTTHUMT00000481702.11546No protein-
 
Retained intron
--
SPTAN1-026OTTHUMT00000481715.11503No protein-
 
Retained intron
--
SPTAN1-014OTTHUMT00000481703.1993No protein-
 
Retained intron
--
SPTAN1-008OTTHUMT00000054458.1857No protein-
 
Retained intron
--
SPTAN1-027OTTHUMT00000481716.1785No protein-
 
Retained intron
--
SPTAN1-003OTTHUMT00000054471.2714No protein-
 
Retained intron
--
SPTAN1-002OTTHUMT00000054470.2635No protein-
 
Retained intron
--
SPTAN1-012OTTHUMT00000481701.1585No protein-
 
Retained intron
--
SPTAN1-023OTTHUMT00000481712.1581No protein-
 
Retained intron
--
SPTAN1-010OTTHUMT00000481700.1579No protein-
 
Retained intron
--
SPTAN1-025OTTHUMT00000481714.1479No protein-
 
Retained intron
--
SPTAN1-024OTTHUMT00000481713.1438No protein-
 
Retained intron
--
SPTAN1-009OTTHUMT00000481698.1401No protein-
 
Retained intron
--
SPTAN1-022OTTHUMT00000481711.1342No protein-
 
Retained intron
--
SPTAN1-001OTTHUMT00000054469.2272No protein-
 
Retained intron
--
Statistics

Exons: 2 Transcript length: 152 bps Translation length: 51 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 18/05/2016 (Created on 15/02/2016)

Alternative symbols

RP11-216B9.2-037

Annotation Attributes

RNA-Seq supported only [Definitions]

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 128,625,912-128,626,391 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays