Transcript: TRAPPC2-002 OTTHUMT00000055805.2

Description

trafficking protein particle complex 2

Location

Chromosome X: 13,712,247-13,734,556 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000021157 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TRAPPC2-002	OTTHUMT00000055805.2	2776	140aa	OTTHUMP00000022938	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48082	P0DI82
TRAPPC2-005	OTTHUMT00000377268.2	678	174aa	OTTHUMP00000225890	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48083	-
TRAPPC2-008	OTTHUMT00000377272.2	562	74aa	OTTHUMP00000225893	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RFG0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TRAPPC2-006	OTTHUMT00000377271.1	561	113aa	OTTHUMP00000225892	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F5H785
TRAPPC2-003	OTTHUMT00000055806.4	1982	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TRAPPC2-001	OTTHUMT00000055804.2	3108	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TRAPPC2-004	OTTHUMT00000377269.2	1411	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TRAPPC2-007	OTTHUMT00000377270.1	475	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,776 bps Translation length: 140 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS48082

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 08/08/2003)

Alternative symbols

GS1-526D21.1-002

Remarks

non canonical U12

Other assemblies

This transcript maps to 13,712,247-13,734,556 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000380579

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TRAPPC2-002 OTTHUMT00000055805.2

Summary

Transcript-based displays