Transcript: HOXA3-002 OTTHUMT00000134388.4

Description

homeobox A3

Location

Chromosome 7: 27,107,012-27,140,219 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 24 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000023209 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HOXA3-001	OTTHUMT00000358708.2	3263	443aa	OTTHUMP00000217262	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5404	O43365
HOXA3-002	OTTHUMT00000134388.4	2761	443aa	OTTHUMP00000067265	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5404	O43365
HOXA3-005	OTTHUMT00000134391.6	581	84aa	OTTHUMP00000196024	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	O43365	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HOXA3-004	OTTHUMT00000313692.3	503	54aa	OTTHUMP00000194928	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HOXA3-003	OTTHUMT00000134389.1	1951	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
HOXA3-006	OTTHUMT00000134390.2	598	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HOXA3-008	OTTHUMT00000358710.1	541	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 2,761 bps Translation length: 443 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5404

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 28/02/2014 (Created on 13/01/2005)

Alternative symbols

RP1-167F23.4-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 27,107,012-27,140,219 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000317201

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HOXA3-002 OTTHUMT00000134388.4

Summary

Transcript-based displays