Transcript: PROX1-001 OTTHUMT00000089727.6

Description

prospero homeobox 1

Location

About this transcript

This transcript has 5 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PROX1-001	OTTHUMT00000089727.6	8240	737aa	OTTHUMP00000035023	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31021	Q92786
PROX1-002	OTTHUMT00000089990.4	3075	737aa	OTTHUMP00000216821	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31021	Q92786
PROX1-004	OTTHUMT00000357872.2	900	230aa	OTTHUMP00000216820	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PROX1-006	OTTHUMT00000470778.2	560	143aa	OTTHUMP00000273519	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PROX1-003	OTTHUMT00000357871.1	1640	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PROX1-005	OTTHUMT00000470777.1	562	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 8,240 bps Translation length: 737 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS31021

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 6, last modified on 27/02/2014 (Created on 28/04/2004)

Alternative symbols

RP11-53A1.1-001

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 213,987,943-214,041,252 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000366958

Curation Method

Manual annotation from Havana