HumanVega Home
Description

sodium channel, voltage-gated, type I, alpha subunit

About this transcript

This transcript has 3 exons.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SCN1A-011OTTHUMT00000490178.185621998aaOTTHUMP00000282545
 
Protein coding
CCDS33316-
SCN1A-001OTTHUMT00000102661.585332009aaOTTHUMP00000041051
 
Protein coding
CCDS54413P35498
SCN1A-017OTTHUMT00000490186.282991998aaOTTHUMP00000282552
 
Protein coding
CCDS33316-
SCN1A-002OTTHUMT00000102662.380971998aaOTTHUMP00000041052
 
Protein coding
CCDS33316-
SCN1A-003OTTHUMT00000333750.459461981aaOTTHUMP00000205012
 
Protein coding
CCDS54414-
SCN1A-015OTTHUMT00000490183.1101071618aaOTTHUMP00000282549
 
Protein coding
-A0A1B0GVX7
SCN1A-018OTTHUMT00000491107.181311998aaOTTHUMP00000282940
 
Protein coding
--
SCN1A-012OTTHUMT00000490179.11003aaOTTHUMP00000282546
 
Protein coding
--CDS 3' incomplete
SCN1A-013OTTHUMT00000490184.18508829aaOTTHUMP00000282550
 
Nonsense mediated decay
-A0A1B0GUX7
SCN1A-009OTTHUMT00000490137.14268331aaOTTHUMP00000282519
 
Nonsense mediated decay
-A0A1B0GUN7 CDS 5' incomplete
SCN1A-010OTTHUMT00000490138.13606145aaOTTHUMP00000282520
 
Nonsense mediated decay
--
SCN1A-014OTTHUMT00000490185.116830aaOTTHUMP00000282551
 
Nonsense mediated decay
--CDS 5' incomplete
SCN1A-008OTTHUMT00000481551.1139No protein-
 
Processed transcript
--
SCN1A-016OTTHUMT00000490187.14614No protein-
 
Retained intron
--
SCN1A-007OTTHUMT00000470907.2711No protein-
 
Retained intron
--
SCN1A-006OTTHUMT00000481550.1560No protein-
 
Retained intron
--
SCN1A-005OTTHUMT00000333752.2544No protein-
 
Retained intron
--
SCN1A-004OTTHUMT00000333751.1542No protein-
 
Retained intron
--
Statistics

Exons: 3 Transcript length: 544 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/02/2016 (Created on 05/08/2008)

Alternative symbols

AC010127.1-005

Remarks

non canonical U12

Other assemblies

This transcript maps to 165,996,053-166,000,063 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays