Transcript: GRIK5-001 OTTHUMT00000104008.2

Description

glutamate receptor, ionotropic, kainate 5

Location

About this transcript

This transcript has 19 exons and is annotated with 29 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
GRIK5-002	OTTHUMT00000463453.1	3493	980aa	OTTHUMP00000270054	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12595	Q16478
GRIK5-001	OTTHUMT00000104008.2	3310	981aa	OTTHUMP00000042062	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS77305	-
GRIK5-004	OTTHUMT00000463454.1	3308	980aa	OTTHUMP00000270055	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12595	Q16478
GRIK5-005	OTTHUMT00000463456.1	2101	110aa	OTTHUMP00000270056	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
GRIK5-003	OTTHUMT00000463452.1	2370	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
GRIK5-006	OTTHUMT00000463455.1	389	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 3,310 bps Translation length: 981 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS77305

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 22/01/2003)

Alternative symbols

AC010616.1-001

Other assemblies

This transcript maps to 42,001,786-42,065,805 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000301218

Curation Method

Manual annotation from Havana