Transcript: ERCC8-001 OTTHUMT00000214971.2

Description

excision repair cross-complementing rodent repair deficiency, complementation group 8

Location

Chromosome 5: 60,873,832-60,945,051 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 23 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000097741 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ERCC8-001	OTTHUMT00000214971.2	2017	396aa	OTTHUMP00000123367	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3978	Q13216
ERCC8-005	OTTHUMT00000332608.2	684	134aa	OTTHUMP00000204442	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ERCC8-003	OTTHUMT00000332606.1	2236	57aa	OTTHUMP00000204441	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ERCC8-004	OTTHUMT00000332607.1	3424	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ERCC8-008	OTTHUMT00000332611.1	582	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ERCC8-007	OTTHUMT00000332610.1	471	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ERCC8-002	OTTHUMT00000332605.1	881	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ERCC8-006	OTTHUMT00000332609.1	752	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,017 bps Translation length: 396 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3978

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 23/09/2005)

Alternative symbols

AC104113.1-001

Other assemblies

This transcript maps to 60,873,832-60,945,051 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000265038

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ERCC8-001 OTTHUMT00000214971.2

Summary

Transcript-based displays