Transcript: HAVCR2-007 OTTHUMT00000373706.2

Description

hepatitis A virus cellular receptor 2

Location

About this transcript

This transcript has 5 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HAVCR2-001	OTTHUMT00000252574.2	2907	301aa	OTTHUMP00000160742	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4333	Q8TDQ0
HAVCR2-004	OTTHUMT00000373703.1	975	273aa	OTTHUMP00000224056	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RHN3
HAVCR2-007	OTTHUMT00000373706.2	566	74aa	OTTHUMP00000224057	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HAVCR2-003	OTTHUMT00000373702.1	1770	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
HAVCR2-005	OTTHUMT00000373704.1	566	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HAVCR2-002	OTTHUMT00000373701.1	1010	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HAVCR2-006	OTTHUMT00000373705.1	795	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 566 bps Translation length: 74 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 07/01/2010)

Alternative symbols

AC008491.2-007

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 157,095,408-157,142,869 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000524219

Curation Method

Manual annotation from Havana