Transcript: SIMC1-002 OTTHUMT00000329099.2

Description

SUMO-interacting motifs containing 1

Location

Chromosome 5: 176,238,367-176,345,989 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000130663 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SIMC1-001	OTTHUMT00000253155.2	3572	872aa	OTTHUMP00000161247	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS78089	Q8NDZ2
SIMC1-002	OTTHUMT00000329099.2	1925	457aa	OTTHUMP00000202935	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4398	-
SIMC1-003	OTTHUMT00000329100.1	1891	333aa	OTTHUMP00000202936	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS78090	-
SIMC1-005	OTTHUMT00000334092.1	3442	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SIMC1-009	OTTHUMT00000371911.1	847	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SIMC1-008	OTTHUMT00000371910.1	697	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SIMC1-010	OTTHUMT00000371912.1	461	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SIMC1-007	OTTHUMT00000334094.1	364	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SIMC1-006	OTTHUMT00000334093.1	913	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SIMC1-004	OTTHUMT00000329101.1	896	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,925 bps Translation length: 457 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4398

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 23/05/2008)

Alternative symbols

AC138956.1-002

Other assemblies

This transcript maps to 176,238,367-176,345,989 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000430704

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SIMC1-002 OTTHUMT00000329099.2

Summary

Transcript-based displays