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Description

spastic paraplegia 11 (autosomal recessive)

Location
About this transcript

This transcript has 38 exons and is annotated with 12 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SPG11-001OTTHUMT00000253927.177742443aaOTTHUMP00000161846
 
Protein coding
CCDS10112Q96JI7
SPG11-002OTTHUMT00000415729.172882330aaOTTHUMP00000247091
 
Protein coding
CCDS53939-
SPG11-004OTTHUMT00000415730.169352265aaOTTHUMP00000247092
 
Protein coding
-C4B7M2
SPG11-006OTTHUMT00000415731.264262079aaOTTHUMP00000247093
 
Protein coding
--
SPG11-003OTTHUMT00000415732.12579779aaOTTHUMP00000247094
 
Protein coding
-H0YN34
SPG11-007OTTHUMT00000415798.12127567aaOTTHUMP00000247124
 
Protein coding
--CDS 5' incomplete
SPG11-019OTTHUMT00000415800.2750250aaOTTHUMP00000247125
 
Protein coding
--CDS 5' and 3' incomplete
SPG11-023OTTHUMT00000415814.1620138aaOTTHUMP00000247130
 
Protein coding
--CDS 5' incomplete
SPG11-010OTTHUMT00000415815.1411107aaOTTHUMP00000247131
 
Protein coding
--CDS 5' incomplete
SPG11-005OTTHUMT00000415733.12808No protein-
 
Artifact
--
SPG11-021OTTHUMT00000415818.2468156aaOTTHUMP00000247133
 
Non stop decay
--CDS 5' incomplete
SPG11-013OTTHUMT00000415809.1571102aaOTTHUMP00000247128
 
Nonsense mediated decay
--CDS 5' incomplete
SPG11-016OTTHUMT00000415805.1561131aaOTTHUMP00000247126
 
Nonsense mediated decay
--CDS 5' incomplete
SPG11-025OTTHUMT00000415808.144799aaOTTHUMP00000247127
 
Nonsense mediated decay
--CDS 5' incomplete
SPG11-022OTTHUMT00000415816.141343aaOTTHUMP00000247132
 
Nonsense mediated decay
--CDS 5' incomplete
SPG11-014OTTHUMT00000415807.1879No protein-
 
Processed transcript
--
SPG11-015OTTHUMT00000415806.1858No protein-
 
Processed transcript
--
SPG11-027OTTHUMT00000415801.1716No protein-
 
Processed transcript
--
SPG11-008OTTHUMT00000415817.11816No protein-
 
Retained intron
--
SPG11-026OTTHUMT00000415804.1759No protein-
 
Retained intron
--
SPG11-012OTTHUMT00000415811.1629No protein-
 
Retained intron
--
SPG11-024OTTHUMT00000415812.1555No protein-
 
Retained intron
--
SPG11-018OTTHUMT00000415802.1530No protein-
 
Retained intron
--
SPG11-011OTTHUMT00000415813.1526No protein-
 
Retained intron
--
SPG11-017OTTHUMT00000415803.1518No protein-
 
Retained intron
--
SPG11-020OTTHUMT00000415799.1437No protein-
 
Retained intron
--
Statistics

Exons: 38 Transcript length: 7,288 bps Translation length: 2,330 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS53939

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 20/05/2011)

Alternative symbols

AC009996.3-002

Remarks

NP_001153699

Other assemblies

This transcript maps to 44,562,854-44,663,675 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays