Transcript: CASP6-004 OTTHUMT00000363779.2

Description

caspase 6, apoptosis-related cysteine peptidase

Location

Chromosome 4: 109,694,524-109,702,849 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000131914 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CASP6-001	OTTHUMT00000254866.1	1548	293aa	OTTHUMP00000162742	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3684	P55212
CASP6-002	OTTHUMT00000254867.3	1347	204aa	OTTHUMP00000162743	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3685	-
CASP6-004	OTTHUMT00000363779.2	587	143aa	OTTHUMP00000219717	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D6RHU3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CASP6-003	OTTHUMT00000363778.1	538	80aa	OTTHUMP00000219716	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D6RBM3
CASP6-006	OTTHUMT00000363781.1	643	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CASP6-009	OTTHUMT00000363784.1	892	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CASP6-008	OTTHUMT00000363783.1	774	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CASP6-007	OTTHUMT00000363782.1	543	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 587 bps Translation length: 143 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 18/09/2009)

Alternative symbols

AC105314.1-004

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 109,694,524-109,702,849 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000503684

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CASP6-004 OTTHUMT00000363779.2

Summary

Transcript-based displays