Description
methyl-CpG binding domain protein 1
Location
Chromosome 18: 50,269,629-50,279,992 reverse strand.
About this transcript
This transcript has 13 exons and is annotated with 19 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000132669 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
MBD1-004 | OTTHUMT00000255926.3 | 4905 | 605aa | OTTHUMP00000163507 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11943 | Q9UIS9 | |
MBD1-010 | OTTHUMT00000448755.1 | 2956 | 550aa | OTTHUMP00000262865 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56072 | - | |
MBD1-011 | OTTHUMT00000448756.2 | 2913 | 655aa | OTTHUMP00000262941 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59320 | - | |
MBD1-002 | OTTHUMT00000255924.1 | 2820 | 556aa | OTTHUMP00000163505 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11944 | - | |
MBD1-008 | OTTHUMT00000448751.2 | 2532 | 567aa | OTTHUMP00000262939 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59318 | - | |
MBD1-013 | OTTHUMT00000448759.1 | 2473 | 630aa | OTTHUMP00000262869 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56073 | - | |
MBD1-005 | OTTHUMT00000448753.2 | 2434 | 605aa | OTTHUMP00000262864 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11943 | Q9UIS9 | |
MBD1-007 | OTTHUMT00000448758.2 | 2179 | 630aa | OTTHUMP00000262868 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56073 | - | |
MBD1-012 | OTTHUMT00000448757.1 | 1945 | 535aa | OTTHUMP00000262867 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59319 | - | |
MBD1-001 | OTTHUMT00000255923.1 | 1845 | 549aa | OTTHUMP00000163504 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11942 | - | |
MBD1-016 | OTTHUMT00000448766.2 | 1761 | 586aa | OTTHUMP00000262874 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32832 | - | |
MBD1-014 | OTTHUMT00000448760.1 | 1611 | 536aa | OTTHUMP00000262870 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56071 | - | |
MBD1-003 | OTTHUMT00000255925.2 | 1512 | 503aa | OTTHUMP00000163506 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11941 | - | |
MBD1-026 | OTTHUMT00000448882.2 | 2178 | 566aa | OTTHUMP00000262943 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A0MS90 | |
MBD1-009 | OTTHUMT00000448752.2 | 1952 | 416aa | OTTHUMP00000262940 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EPZ6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
MBD1-024 | OTTHUMT00000448774.2 | 836 | 240aa | OTTHUMP00000262942 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
MBD1-025 | OTTHUMT00000448789.3 | 767 | 256aa | OTTHUMP00000262944 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EMA9 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
MBD1-006 | OTTHUMT00000448754.2 | 2390 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
MBD1-017 | OTTHUMT00000448772.2 | 749 | 44aa | OTTHUMP00000262945 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7EIN3 | |
MBD1-019 | OTTHUMT00000448770.2 | 1012 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MBD1-020 | OTTHUMT00000448771.1 | 673 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MBD1-021 | OTTHUMT00000448769.1 | 533 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MBD1-023 | OTTHUMT00000448767.1 | 514 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MBD1-022 | OTTHUMT00000448768.1 | 482 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MBD1-018 | OTTHUMT00000448773.1 | 385 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |