Description
PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
Location
Chromosome 2: 152,657,955-152,659,377 reverse strand.
About this transcript
This transcript has 4 exons.
Gene
This transcript is a product of gene OTTHUMG00000154031 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PRPF40A-001 | OTTHUMT00000333559.2 | 8048 | 930aa | OTTHUMP00000204906 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46430 | - | |
| PRPF40A-004 | OTTHUMT00000333562.5 | 1358 | 448aa | OTTHUMP00000237428 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H578 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PRPF40A-016 | OTTHUMT00000397217.1 | 1043 | 346aa | OTTHUMP00000237429 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YG38 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PRPF40A-008 | OTTHUMT00000333566.8 | 490 | 163aa | OTTHUMP00000206002 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PRPF40A-015 | OTTHUMT00000333573.3 | 1622 | 109aa | OTTHUMP00000206003 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PRPF40A-003 | OTTHUMT00000333561.1 | 569 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PRPF40A-006 | OTTHUMT00000333564.2 | 776 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRPF40A-009 | OTTHUMT00000333567.2 | 546 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRPF40A-002 | OTTHUMT00000333560.1 | 496 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRPF40A-013 | OTTHUMT00000333571.1 | 333 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRPF40A-014 | OTTHUMT00000333572.1 | 293 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRPF40A-012 | OTTHUMT00000333570.1 | 243 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
