Transcript: SRPRB-005 OTTHUMT00000357174.1

Description

signal recognition particle receptor, B subunit

Location

About this transcript

This transcript has 5 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SRPRB-001	OTTHUMT00000357170.2	2827	271aa	OTTHUMP00000216377	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3081	Q549N5
SRPRB-003	OTTHUMT00000357172.2	512	92aa	OTTHUMP00000216378	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J5Z8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SRPRB-005	OTTHUMT00000357174.1	917	160aa	OTTHUMP00000216379	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SRPRB-002	OTTHUMT00000357171.1	1487	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SRPRB-004	OTTHUMT00000357173.1	555	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 917 bps Translation length: 160 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 25/06/2009)

Alternative symbols

RP11-404G16.3-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 133,811,124-133,825,772 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000466636

Curation Method

Manual annotation from Havana