Transcript: DBR1-004 OTTHUMT00000357588.2

Description

debranching enzyme homolog 1 (S. cerevisiae)

Location

About this transcript

This transcript has 5 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
DBR1-001	OTTHUMT00000357585.1	2666	544aa	OTTHUMP00000216654	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33863	Q9UK59
DBR1-005	OTTHUMT00000357589.1	2189	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
DBR1-004	OTTHUMT00000357588.2	838	118aa	OTTHUMP00000216655	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WAY1
DBR1-002	OTTHUMT00000357586.2	623	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
DBR1-003	OTTHUMT00000357587.1	572	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 838 bps Translation length: 118 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 02/07/2009)

Alternative symbols

RP11-468F18.4-004

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 138,163,349-138,174,859 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000477557

Curation Method

Manual annotation from Havana