Transcript: MTDH-001 OTTHUMT00000379772.2

Description

metadherin

Location

About this transcript

This transcript has 12 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
MTDH-001	OTTHUMT00000379772.2	6177	582aa	OTTHUMP00000227231	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6274	A0A024R9D2
MTDH-002	OTTHUMT00000379773.2	2184	526aa	OTTHUMP00000227366	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RJU9
MTDH-003	OTTHUMT00000380011.2	672	224aa	OTTHUMP00000227367	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YB56	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
MTDH-006	OTTHUMT00000380927.2	565	188aa	OTTHUMP00000227902	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YBJ8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
MTDH-004	OTTHUMT00000380012.1	629	60aa	OTTHUMP00000227368	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YBE0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
MTDH-005	OTTHUMT00000380448.1	486	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 6,177 bps Translation length: 582 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6274

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 18/03/2010)

Alternative symbols

KB-1907C4.1-001

Other assemblies

This transcript maps to 97,644,179-97,728,770 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000336273

Curation Method

Manual annotation from Havana